So, I thought restart the hda machine will do the trick and did it.. on reboot, fedora wont start, checked the log was getting DRDY ERR and READ UNC, cant find file or directory, errors allover the place.. did some research and figured that it could be my SSD..
Booted on to a USB Ubuntu to find out SMART results.. and as guesses few thousands of bad sectors, unreadable sectors etc.. so it was a sh1t moment..
Luckily the SSD is still under warranty, so I can RMA it and get a replacement.
However, the biggest questions are:
1. I had wordpress, and wiki running on this server, how do i backup that data (if those folders are not affected)
2. I had hda running with few users with permissions, greyhole etc etc config, how can backup hda config
3. What other things i need to look for on this drive if anything can be salvaged
4. suppose if i have salvaged the wordpress and wiki mysql db's also hda config how can I restore them in my new installation
5. the machine has three hdd's for storage, how can I put them back in the new installation without loosing any data
Finally, just in time the Ubuntu HDA seems to be shaping up very well, so how compatible the above files are between fedora and ubuntu.. is it possible at all, at the expense of few nights of geekieness...

Thanks for your help in advance..